KEGG   Sus scrofa (pig): 397587
Entry
397587            CDS       T01009                                 
Symbol
CAPNS1
Name
(RefSeq) calpain small subunit 1
  KO
K08583  calpain, small subunit 1
Organism
ssc  Sus scrofa (pig)
Brite
KEGG Orthology (KO) [BR:ssc00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:ssc01002]
    397587 (CAPNS1)
Peptidases and inhibitors [BR:ssc01002]
 Cysteine peptidases
  Family C2: calpain family
   397587 (CAPNS1)
SSDB
Motif
Pfam: EF-hand_6 EF-hand_1 EF-hand_7 EF-hand_8 EF-hand_5
Other DBs
NCBI-GeneID: 397587
NCBI-ProteinID: NP_999483
Ensembl: ENSSSCG00000030149
UniProt: P04574 A0A480VEK3
Structure
Position
6:45511410..45518610
AA seq 266 aa
MFLVNSFLKGGGGGGGGGGGLGGGLGNVLGGLISGAGGGGGGGGGGGGGGGGGGTAMRIL
GGVISAISEAAAQYNPEPPPPRTHYSNIEANESEEVRQFRRLFAQLAGDDMEVSATELMN
ILNKVVTRHPDLKTDGFGIDTCRSMVAVMDSDTTGKLGFEEFKYLWNNIKKWQAIYKQFD
VDRSGTIGSSELPGAFEAAGFHLNEHLYSMIIRRYSDEGGNMDFDNFISCLVRLDAMFRA
FKSLDKDGTGQIQVNIQEWLQLTMYS
NT seq 801 nt   +upstreamnt  +downstreamnt
atgttcctggttaactcgttcctgaagggtggcggcggcggcggcgggggaggcgggggc
ttgggcgggggcctagggaatgtgctcggaggcctgatcagcggggccggaggcggcggt
ggcggcggcggtggcggaggaggcggcggcggtggtggcggaactgccatgcgcatcctg
ggcggggttattagcgccatcagtgaggcggctgcgcagtacaaccccgagcccccgccc
cctcgcacccattattccaacattgaggccaatgagagtgaggaggtccggcagtttcgg
aggctctttgcccagctggctggagatgacatggaggtcagtgccacggaactcatgaac
attctcaacaaggtcgtgacccgacaccctgatctgaagactgatggttttggcattgac
acatgtcgaagcatggtggctgtgatggatagtgacacaaccggcaagctgggcttcgag
gaattcaagtacttgtggaacaacatcaaaaagtggcaggccatatacaaacagttcgat
gttgaccgttcagggaccattggcagcagtgaactcccaggggcctttgaagccgcagga
ttccacctgaatgagcatctctacagcatgatcatccgacgctactcagatgagggaggg
aacatggattttgacaactttatcagctgcctggtcagactggatgccatgttccgtgcc
ttcaaatctcttgacaaagatggtactggacaaatccaggtgaacatccaggagtggctg
cagctgaccatgtattcctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   RefGene (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (4)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (11)   
   RefSeq(nuc) (1)   
   GenBank (5)   
   EMBL (5)   
3D Structure (7)   
   PDB (7)   
Protein domain (5)   
   Pfam (5)   
All databases (36)   

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